Composition descriptor (CTDC)

Source: R/internal_hyp.R

This function calculates the Composition descriptor

CTDC(x)

Arguments

x

A vector of k-mers (character vector)

Value

A matrix with the Composition descriptor (dim: 21)

Note

This is an internal function used inside predict_hyp

References

Inna Dubchak, Ilya Muchink, Stephen R. Holbrook and Sung-Hou Kim. Prediction of protein folding class using global description of amino acid sequence. Proceedings of the National Academy of Sciences. USA, 1995, 92, 8700-8704.

See also

predict_hyp extractCTDC

Author

original R code by Nan Xiao